ADASTRA v1.6.10
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rs711814
chr2:176104613
T
>
C
Sequence
gcaggcaaggacaaggccacagag[T/C]cggggtcttcacggtaggttctcg
ASB in cell types
HEK293T (embryonic kidney)
HEK293 (embryonic kidney)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293T (embryonic kidney)
-0.15
0.91
0.82
2.3·10
-3
2.00
HEK293 (embryonic kidney)
0.50
0.42
0.01
0.06
1.27
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5
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Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol
,
serum creatinine
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Aorta
,
Artery_Tibial
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Colon_Transverse
,
Esophagus_Mucosa
,
Nerve_Tibial
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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