rs713074 chr1:209590628 A>G
- Sequence
aggccgtcattccatggaagctcc[A/G]gaagagggagtgatggacgcctgg
- ASB in cell types
- epithelial cell of prostate SK-N-SH (neuroblastoma) Peyer's patch neural cell
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.69 | -0.13 | 1.42 | -0.92 | Weak Concordant | |||
| RAD21_HUMAN | 1.87 | -0.23 | 1.28 | n/a | n/a | |||
| SMC3_HUMAN | 1.74 | -1.54 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
