ADASTRA v1.6.10
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rs713130
chr18:70293358
A
>
G
Sequence
ccccaacagccccacagagagaca[A/G]ctgtcactgcctgtagagctatga
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts
K562 (myelogenous leukemia)
ASB for transcription factors
GATA1_HUMAN
MEIS2_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN
2.15
-0.27
4.0·10
-6
1.00
1.44
n/a
No Hit
MEIS2_HUMAN
-2.23
1.99
1.00
0.02
1.50
0.81
Weak Concordant
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Motif analysis
MEIS2_HUMAN
Weak Concordant
Show reverse complement
Show rev. comp.
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Genetic associations
GRASP
advanced age-related macular degeneration (choroidal neovascularization) vs. no amd
,
body mass index (bmi)
,
diastolic blood pressure (dbp)
,
sporadic creutzfeldt-jakob disease
GTEx eQTL
Esophagus_Mucosa
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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