rs7132224 chr12:130871501 A>G
- Sequence
ggctacgatctggagagacagaac[A/G]gcgggctgcctctggaggacgggc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) HCT-116 (colon carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | -0.02 | 0.82 | 2.02 | |||
| HEK293 (embryonic kidney) | 1.17 | -0.21 | 1.98 | |||
| HCT-116 (colon carcinoma) | 1.34 | -0.86 | 1.17 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Hippocampus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Thyroid, Whole_Blood