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rs713588 chr10:5844999 A>G

Sequence
attatttacccctaaggcctggga[A/G]gagtttttatttcagcttgtctca
ASB in cell types
K562 (myelogenous leukemia) GM12878 (female B-cells)
ASB for transcription factors
IKZF2_HUMAN PKNX1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN n/a 1.73 1.003.1·10-3 1.67 n/a n/a
PKNX1_HUMAN -2.89 1.82 1.000.03 1.75 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP birth weight breast cancer ldl cholesterol refractive error
GTEx eQTL Adipose_Subcutaneous Artery_Tibial Breast_Mammary_Tissue Cells_Cultured_fibroblasts Esophagus_Mucosa Esophagus_Muscularis Lung Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Stomach Testis Thyroid

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