rs7137742 chr12:124940075 G>A
- Sequence
ttttcgggcaaattacagtcacgt[G/A]gttacaaaagcttggaagaggacc
- ASB in cell types
- K562 (myelogenous leukemia) HEK293 (embryonic kidney) HepG2 (hepatoblastoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- MNT_HUMAN MGAP_HUMAN LMBL2_HUMAN MAX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MNT_HUMAN | 2.70 | -0.74 | 1.67 | n/a | n/a | |||
| MGAP_HUMAN | 3.41 | n/a | 2.00 | n/a | n/a | |||
| LMBL2_HUMAN | 3.02 | n/a | 2.00 | n/a | n/a | |||
| MAX_HUMAN | 1.72 | -0.78 | 1.62 | -6.83 | Concordant | |||
| HIF1A_HUMAN | -2.68 | 2.47 | 1.50 | 3.39 | Concordant |
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Motif analysis
