rs713989 chr22:25110812 C>T
- Sequence
ggagctcacgtgacctagtgtaaa[C/T]catgaatcattcccattgctccca
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma) neural cell
- ASB for transcription factors
- CTCF_HUMAN SNAI2_HUMAN ZSCA4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.62 | 0.70 | 1.42 | n/a | No Hit | |||
| SNAI2_HUMAN | 1.93 | -1.87 | 1.50 | n/a | No Hit | |||
| ZSCA4_HUMAN | 1.79 | n/a | 2.00 | n/a | n/a |
Items per page:
1 – 3 of 3