rs7144000 chr14:74883202 C>G
- Sequence
ccagctcctcgggaggctgaggca[C/G]gagaatggcgtgaagccgggaggc
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- SP2_HUMAN ZN600_HUMAN ZBT17_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP2_HUMAN | -2.42 | 2.22 | 1.00 | 1.08 | Weak Concordant | |||
| ZN600_HUMAN | n/a | 2.22 | 1.33 | n/a | n/a | |||
| ZBT17_HUMAN | n/a | 1.91 | 1.33 | 3.82 | Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Caudate_basal_ganglia, Brain_Cortex, Brain_Frontal_Cortex_BA9, Brain_Nucleus_accumbens_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Nerve_Tibial, Thyroid