rs71512927 chr1:16905260 C>T
- Sequence
tttactgtaaggctgagggctatg[C/T]attctatggctatgttgttgtctc
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- T2AG_HUMAN MNT_HUMAN CEBPB_HUMAN ATF7_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| T2AG_HUMAN | 3.22 | n/a | 1.33 | n/a | n/a | |||
| MNT_HUMAN | 2.89 | -1.62 | 2.50 | n/a | n/a | |||
| CEBPB_HUMAN | 2.53 | n/a | 1.33 | n/a | No Hit | |||
| ATF7_HUMAN | 3.28 | n/a | 3.00 | n/a | n/a | |||
| LMBL2_HUMAN | 2.87 | n/a | 3.00 | n/a | n/a |
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