rs716173 chr11:19919433 G>A
- Sequence
cactccagacagtgagaactgtgt[G/A]tttactgggctgcttccagtcagc
- ASB in cell types
- LHSAR (prostate epithelial cells) LNCaP (prostate carcinoma) PC3 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 1.71 | -0.76 | 1.80 | n/a | No Hit | |||
| FOXA1_HUMAN | 1.48 | -0.18 | 2.00 | -1.03 | Weak Concordant |
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Motif analysis
