rs7167951 chr15:71386624 T>G
- Sequence
gcctttaatgcagacatttaaatt[T/G]ccagcagatggagatgttaccacg
- ASB in cell types
- neural cell IPSC-derived bipolar neuron bipolar neuron hepatocytes
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.08 | 1.17 | 1.37 | 2.05 | Concordant | |||
| RAD21_HUMAN | -0.44 | 1.14 | 1.31 | n/a | n/a | |||
| SMC3_HUMAN | -1.00 | 1.00 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3
Motif analysis
