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rs716969 chr6:52390043 T>A

Sequence
agtgggagtttcagacagcaaagt[T/A]tacctttactcaaacaagaagcct
ASB in cell types
HepG2 (hepatoblastoma) GM12878 (female B-cells)
ASB for transcription factors
FOXK2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 1.62 0.41 0.031.00 1.67 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy) aortic valve calcium total cholesterol
GTEx eQTL Cells_Cultured_fibroblasts Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis

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