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rs7179827 chr15:74048639 A>G

Sequence
ctggcaacgggcatgggccacggt[A/G]gtgctggtggtgctggtggtttaa
ASB in cell types
epithelial cell of prostate HEK293T (embryonic kidney)
ASB for transcription factors
PRDM9_HUMAN MYB_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PRDM9_HUMAN -2.20 2.02 1.007.4·10-4 1.33 n/a n/a
MYB_HUMAN 0.93 0.08 0.040.79 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Gastroesophageal_Junction Thyroid Whole_Blood

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