rs7186084 chr16:68782357 G>C
- Sequence
ctcagaggcagttgcagaagtttc[G/C]agttctgcaaaagccatctgtggc
- ASB in cell types
- GM12878 (female B-cells) GM12891 (male B-cells) HL-60 (acute myeloid leukemia)
- ASB for transcription factors
- SPI1_HUMAN IKZF2_HUMAN ZN687_HUMAN COE1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | -0.32 | 1.67 | 1.56 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.74 | -2.15 | 1.42 | n/a | n/a | |||
| ZN687_HUMAN | 2.21 | -2.25 | 1.33 | n/a | n/a | |||
| COE1_HUMAN | 0.94 | -0.35 | 1.33 | n/a | No Hit |
Items per page:
1 – 4 of 4
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Caudate_basal_ganglia, Brain_Hippocampus, Brain_Putamen_basal_ganglia, Brain_Substantia_nigra, Esophagus_Mucosa, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Small_Intestine_Terminal_Ileum, Spleen, Testis, Whole_Blood