rs7197860 chr16:81625059 G>T
- Sequence
cctgagtgtagagaggataagtca[G/T]tcgcacaaggttccaaggccacca
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma)
- ASB for transcription factors
- TAL1_HUMAN HDAC1_HUMAN GABP1_HUMAN ZN316_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | -2.45 | 2.24 | 2.40 | n/a | No Hit | |||
| HDAC1_HUMAN | -2.61 | 2.52 | 2.33 | n/a | n/a | |||
| GABP1_HUMAN | -3.55 | 2.45 | 2.00 | n/a | n/a | |||
| ZN316_HUMAN | -1.35 | 1.99 | 2.00 | n/a | n/a | |||
| ARNT_HUMAN | -3.51 | 1.97 | 2.38 | n/a | No Hit |
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