rs719856 chr6:47626986 G>A
- Sequence
tgacttgctttcaataactgttac[G/A]taatgcagttgatgttgtaaccta
- ASB in cell types
- mesenchymal stem cells LHSAR (prostate epithelial cells)
- ASB for transcription factors
- CEBPB_HUMAN ANDR_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPB_HUMAN | 1.63 | -0.20 | 1.33 | n/a | No Hit | |||
| ANDR_HUMAN | 1.25 | -1.07 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis