rs7206063 chr16:2907230 G>A
- Sequence
acgggtgtcttcccagacgctggc[G/A]tcaccgctagaccaaggagccctc
- ASB in cell types
- RH4 (alveolar rhabdomyosarcoma) MCF10CA1a (breast metastatic epithelial cells) pancreas transverse colon
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.19 | 0.18 | 1.41 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Thyroid