ADASTRA v1.6.10
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adastra.autosome.org
rs7207930
chr17:62039239
G
>
A
Sequence
agtctgatcttattgtaacattca[G/A]tggtttaaaataaaccaagtttgt
ASB in cell types
MCF7 (Invasive ductal breast carcinoma)
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MCF7 (Invasive ductal breast carcinoma)
0.85
-0.40
3.5·10
-3
1.00
2.69
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5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
obesity with early age of onset (age >2)
,
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Nerve_Tibial
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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