rs7208297 chr17:8295843 T>C
- Sequence
cttgcggggggtagagggacacac[T/C]tgcgctgcgggaccagtctcctga
- ASB in cell types
- keratinocytes
- ASB for transcription factors
- ZBT11_HUMAN SNAI2_HUMAN GLIS2_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT11_HUMAN | 2.58 | n/a | 2.00 | n/a | n/a | |||
| SNAI2_HUMAN | 1.39 | -1.23 | 1.50 | 4.30 | Discordant | |||
| GLIS2_HUMAN | n/a | 2.31 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP bipolar disorder, birth weight, fasting insulin, height, homa-b, homa-ir, sporadic creutzfeldt-jakob disease, systolic blood pressure (sbp), variant creutzfeldt-jakob disease
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Cells_Cultured_fibroblasts, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Skin_Sun_Exposed_Lower_leg, Thyroid