rs7214198 chr17:64478770 G>A
- Sequence
aattagctgggcgtggtggcaggc[G/A]catgtaatcccagctactcgggag
- ASB in cell types
- HEK293 (embryonic kidney)
- ASB for transcription factors
- ZN121_HUMAN ZFHX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN121_HUMAN | n/a | 2.44 | 2.00 | -0.20 | Weak Discordant | |||
| ZFHX2_HUMAN | -2.59 | 2.08 | 1.50 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood