rs7218819 chr17:1456386 T>G
- Sequence
cggattcatgggcggtgccgccct[T/G]cccgggcccgggctgcgggggatg
- ASB in cell types
- breast tumor tissue CD14+ monocytes foreskin keratinocyte neural cell
- ASB for transcription factors
- ESR1_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | n/a | 2.94 | 2.50 | 4.22 | Concordant | |||
| STAT1_HUMAN | -3.28 | 2.21 | 2.50 | n/a | No Hit |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Nerve_Tibial, Thyroid