rs7220849 chr17:33049988 T>C
- Sequence
atctgtctcctgctcactgttgcc[T/C]cctagtggtcccaaggatcagggc
- ASB in cell types
- foreskin keratinocyte RWPE1 (prostate epithelial cells) thyroid gland stem and progenitor cells
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.38 | 1.31 | 1.54 | 4.35 | Concordant |
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Motif analysis
