ADASTRA v1.6.10
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rs724916
chr6:17885171
C
>
T
Sequence
catctcagaggaactggactgaaa[C/T]tgaaaggaaaccccagcaccaaga
ASB in cell types
GM12878 (female B-cells)
periferal blood macrophages
monocyte-derived macrophages
CD14+ monocytes
ASB for transcription factors
SPI1_HUMAN
STAT1_HUMAN
IKZF1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN
0.22
2.48
1.00
8.8·10
-6
2.30
n/a
No Hit
STAT1_HUMAN
-3.33
1.62
1.00
0.02
2.50
n/a
No Hit
IKZF1_HUMAN
1.70
0.23
0.03
1.00
1.33
n/a
No Hit
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
advanced age-related macular degeneration
,
serum creatinine
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Caudate_basal_ganglia
,
Brain_Nucleus_accumbens_basal_ganglia
,
Esophagus_Mucosa
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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log2(Alt/Ref motif p-value)