rs7251298 chr19:42919649 C>T
- Sequence
ggtggacagggagggaagtgtgaa[C/T]ggcagcaatcccaggccaggctgc
- ASB in cell types
- foreskin keratinocyte K562 (myelogenous leukemia)
- ASB for transcription factors
- CTCF_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.39 | -0.53 | 2.36 | n/a | No Hit | |||
| MNT_HUMAN | 1.00 | -1.03 | 1.67 | n/a | n/a |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Visceral_Omentum, Brain_Hippocampus, Brain_Spinal_cord_cervical_c-1, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood