ADASTRA v1.6.10
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rs7252000
chr19:53927968
T
>
C
Sequence
gttctattcagcttggaatgtagg[T/C]gactcttgcctactgtgctttaag
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
REST_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
REST_HUMAN
0.94
-0.52
6.7·10
-5
1.00
1.81
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
,
total cholesterol
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)