rs72633684 chr1:161612710 C>T
- Sequence
tatatagatttctaaaattccaaa[C/T]cggggacgcgttggtggtgtagtg
- ASB in cell types
- K562 (myelogenous leukemia) neural cell HeLa S3 (cervical adenocarcinoma) breast tumor tissue
- ASB for transcription factors
- MEF2D_HUMAN P66B_HUMAN SRBP2_HUMAN MNT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEF2D_HUMAN | n/a | 2.88 | 3.00 | n/a | No Hit | |||
| P66B_HUMAN | n/a | 2.60 | 2.00 | n/a | n/a | |||
| SRBP2_HUMAN | 1.14 | -1.14 | 1.00 | n/a | No Hit | |||
| MNT_HUMAN | 1.01 | 2.12 | 2.12 | n/a | n/a | |||
| ENL_HUMAN | -1.64 | 2.13 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Thyroid, Whole_Blood