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rs72663400 chr5:129461412 G>A

Sequence
ggagctgccgcggggatccagcgg[G/A]gctgccgccttgtccccgggcgcc
ASB in cell types
epithelial cell of prostate
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 1.35 -0.12 1.6·10-41.00 1.50 -1.39 Weak Concordant
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Motif analysis

CTCF_HUMAN Weak Concordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Brain_Frontal_Cortex_BA9 Muscle_Skeletal Skin_Sun_Exposed_Lower_leg

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