rs7269 chr16:70162281 A>G
- Sequence
gtgactcatcgtttgtgtttgtca[A/G]tttgcagttcagcttagcccttcc
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) MCF7 (Invasive ductal breast carcinoma) LHSAR (prostate epithelial cells)
- ASB for transcription factors
- FOS_HUMAN ANDR_HUMAN ZN652_HUMAN JUN_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOS_HUMAN | 1.01 | n/a | 1.50 | n/a | n/a | |||
| ANDR_HUMAN | 2.08 | 0.56 | 1.50 | 1.38 | Weak Discordant | |||
| ZN652_HUMAN | 2.99 | n/a | 2.00 | n/a | n/a | |||
| JUN_HUMAN | 1.33 | -0.10 | 1.83 | n/a | No Hit | |||
| ESR1_HUMAN | 1.30 | -0.34 | 2.79 | n/a | No Hit |
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Motif analysis
