rs726901 chr2:109630010 G>T
- Sequence
acagtcagaagtaaaatacaacac[G/T]cccacacataactacagtgcaaga
- ASB in cell types
- LHSAR (prostate epithelial cells) HEK293 (embryonic kidney)
- ASB for transcription factors
- ANDR_HUMAN ZFHX2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | 2.36 | -1.53 | 1.60 | n/a | No Hit | |||
| ZFHX2_HUMAN | 2.10 | -1.84 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Brain_Hippocampus, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood