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rs72715967 chr1:162161282 G>A

Sequence
ggattaggtcatggacctctttgg[G/A]gggctttgagtctgtctaccataa
ASB in cell types
D283 Med (medulloblastoma)
ASB for transcription factors
OTX2_HUMAN NDF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
OTX2_HUMAN -0.76 1.52 0.923.3·10-3 1.87 n/a No Hit
NDF1_HUMAN -1.63 2.08 1.000.05 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis Heart_Left_Ventricle

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