rs72716536 chr5:7869122 T>C
- Sequence
cccttcggagctttctattggtcc[T/C]gggtaccgagcatgggcgctgcgt
- ASB in cell types
- HEK293 (embryonic kidney) breast tumor tissue T47D (invasive ductal carcinoma) HEK293T (embryonic kidney)
- ASB for transcription factors
- ESR1_HUMAN ZBT20_HUMAN ZBT26_HUMAN ZXDB_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.91 | n/a | 2.00 | n/a | No Hit | |||
| ZBT20_HUMAN | n/a | 3.35 | 3.00 | n/a | n/a | |||
| ZBT26_HUMAN | 0.45 | 0.67 | 2.17 | n/a | n/a | |||
| ZXDB_HUMAN | n/a | 2.94 | 2.50 | n/a | n/a | |||
| SP2_HUMAN | -1.01 | 0.57 | 2.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Cortex, Brain_Frontal_Cortex_BA9, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Whole_Blood