rs7273557 chr20:57106448 C>G
- Sequence
gcaacaacagcaactcccttcgcc[C/G]cagagttcaggcaaaaggtccaca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma)
- ASB for transcription factors
- TBX3_HUMAN RAD51_HUMAN PKNX1_HUMAN ZNF24_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TBX3_HUMAN | 2.45 | n/a | 1.00 | n/a | No Hit | |||
| RAD51_HUMAN | n/a | 2.62 | 3.00 | n/a | n/a | |||
| PKNX1_HUMAN | n/a | 2.44 | 3.00 | n/a | No Hit | |||
| ZNF24_HUMAN | n/a | 2.56 | 4.00 | n/a | n/a | |||
| ELK1_HUMAN | n/a | 2.17 | 5.00 | n/a | No Hit |
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