rs727518 chr10:13220066 A>G
- Sequence
agcaagccattcttggtttttgac[A/G]tctgaaaagccctgcattccttcc
- ASB in cell types
- K562 (myelogenous leukemia) NB69 (neuroblastoma)
- ASB for transcription factors
- CTCF_HUMAN CTBP1_HUMAN NFIC_HUMAN MGAP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.94 | 0.26 | 1.58 | n/a | No Hit | |||
| CTBP1_HUMAN | 2.47 | -3.88 | 2.00 | n/a | n/a | |||
| NFIC_HUMAN | 2.46 | n/a | 2.00 | n/a | No Hit | |||
| MGAP_HUMAN | 2.37 | -3.20 | 2.00 | n/a | n/a |
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