rs72757332 chr15:85825819 C>T
- Sequence
ggagggttcctctcctgccctgct[C/T]atggctggctagctacctactgta
- ASB in cell types
- breast tumor tissue MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN ZBT40_HUMAN PKNX1_HUMAN GRHL2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.17 | n/a | 2.50 | n/a | No Hit | |||
| ZBT40_HUMAN | 1.52 | -1.79 | 1.33 | n/a | n/a | |||
| PKNX1_HUMAN | -1.71 | 1.52 | 1.33 | n/a | No Hit | |||
| GRHL2_HUMAN | 1.20 | 0.19 | 1.48 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Frontal_Cortex_BA9, Brain_Hypothalamus, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid