rs72795882 chr5:130542065 T>C
- Sequence
taacttctaggtgcatgagtcatg[T/C]ggtttgccacatctgcaggctggc
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- SRF_HUMAN ATF7_HUMAN IKZF2_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SRF_HUMAN | n/a | 1.28 | 1.33 | n/a | No Hit | |||
| ATF7_HUMAN | -2.82 | 2.64 | 1.33 | n/a | n/a | |||
| IKZF2_HUMAN | -2.54 | 2.30 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | -2.30 | 2.25 | 1.33 | n/a | No Hit | |||
| MTA2_HUMAN | -2.31 | 2.11 | 1.33 | n/a | n/a |
Items per page:
1 – 5 of 9
Motif analysis
