rs72797417 chr10:58291678 A>G
- Sequence
aaaactgtttctcttagaatccac[A/G]gggaagctgcatctagcacagaag
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- SMC3_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMC3_HUMAN | 1.13 | -0.03 | 1.95 | n/a | n/a | |||
| RAD21_HUMAN | 0.98 | 0.33 | 1.88 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Brain_Cortex, Breast_Mammary_Tissue, Colon_Sigmoid, Esophagus_Mucosa, Nerve_Tibial, Spleen, Testis, Whole_Blood