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rs72846720 chr17:28319433 C>A

Sequence
gcgctgcgtccacagggccttcac[C/A]tcctccgcgctcgcgcactctggg
ASB in cell types
K562 (myelogenous leukemia) foreskin keratinocyte
ASB for transcription factors
RFOX2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFOX2_HUMAN 2.30 n/a 3.9·10-31.00 2.00 n/a n/a
CTCF_HUMAN 1.17 -0.82 0.041.00 2.67 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Artery_Aorta Cells_Cultured_fibroblasts Muscle_Skeletal Pancreas Thyroid

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