ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs72846720
chr17:28319433
C
>
A
Sequence
gcgctgcgtccacagggccttcac[C/A]tcctccgcgctcgcgcactctggg
ASB in cell types
K562 (myelogenous leukemia)
foreskin keratinocyte
ASB for transcription factors
RFOX2_HUMAN
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RFOX2_HUMAN
2.30
n/a
3.9·10
-3
1.00
2.00
n/a
n/a
CTCF_HUMAN
1.17
-0.82
0.04
1.00
2.67
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL
Artery_Aorta
,
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
,
Pancreas
,
Thyroid
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale
log2(Alt/Ref motif p-value)