rs72852235 chr17:74354223 G>A
- Sequence
ggtgaaggccgcccggcggcgctc[G/A]cgggccctgggaaccgaggggcga
- ASB in cell types
- K562 (myelogenous leukemia) HCT-116 (colon carcinoma) SUM159PT (pleiomorphic breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN ZFX_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.64 | 1.33 | 1.48 | n/a | No Hit | |||
| RAD21_HUMAN | -0.29 | 1.09 | 1.69 | n/a | n/a | |||
| ZFX_HUMAN | -1.60 | 1.56 | 2.17 | n/a | No Hit |
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