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rs72876753 chr6:50278787 C>G

Sequence
gcttcagagagcccattcattgtc[C/G]cctccctcctccaagtttcctttt
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
BHE40_HUMAN IKZF1_HUMAN MTA2_HUMAN ELF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
BHE40_HUMAN -2.37 2.20 1.009.6·10-6 1.33 n/a No Hit
IKZF1_HUMAN -2.13 1.76 1.002.1·10-3 1.33 n/a No Hit
MTA2_HUMAN -1.97 2.02 1.000.01 1.33 n/a n/a
ELF1_HUMAN n/a 1.91 1.000.02 1.33 n/a No Hit
ATF7_HUMAN n/a 1.85 1.000.02 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Cells_Cultured_fibroblasts Esophagus_Muscularis Skin_Sun_Exposed_Lower_leg

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