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rs72893026 chr2:172727279 A>G

Sequence
agcctctgggtcatcaggcagagg[A/G]aagagcagacagagggaactcttc
ASB in cell types
cranial neural crest cells
ASB for transcription factors
COT1_HUMAN AP2A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COT1_HUMAN 2.34 n/a 1.4·10-31.00 2.00 3.34 Discordant
AP2A_HUMAN 2.21 -1.79 5.3·10-31.00 2.00 n/a No Hit
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Motif analysis

COT1_HUMAN Discordant
COT1_HUMAN pic

Genetic associations

GTEx eQTL Brain_Frontal_Cortex_BA9

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