rs72941378 chr11:77995041 G>C
- Sequence
aaagggcagaggcggggtgctcca[G/C]agctagaggcaaaacccggagctc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells) periferal blood macrophages CD14+ monocytes
- ASB for transcription factors
- SPI1_HUMAN FOXK2_HUMAN STAT1_HUMAN GABPA_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.18 | 0.26 | 1.88 | n/a | No Hit | |||
| FOXK2_HUMAN | -2.05 | 1.87 | 1.33 | n/a | n/a | |||
| STAT1_HUMAN | 1.50 | n/a | 2.50 | n/a | No Hit | |||
| GABPA_HUMAN | 0.79 | 0.90 | 1.54 | n/a | No Hit | |||
| MNT_HUMAN | 1.75 | -1.48 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Brain_Cerebellum, Brain_Cortex, Colon_Transverse, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Whole_Blood