ADASTRA v1.6.10
Search
Browse
Annotate
Help
Downloads
About
Attention!
You are using release
Soos
. You can switch to the latest ADASTRA version:
adastra.autosome.org
rs729820
chr3:195200602
A
>
G
Sequence
ggcgaccagggttcactgacctac[A/G]atcggttgactcacatgaacaccc
ASB in cell types
HepG2 (hepatoblastoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
Reset
hidden submit
Filter
Get TSV
Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HepG2 (hepatoblastoma)
0.21
0.54
0.78
0.05
1.28
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
college completion
,
diastolic blood pressure (dbp)
,
hdl cholesterol
,
neuroblastoma (brain cancer)
,
spine bone mineral density (bmd)
,
systolic blood pressure (sbp)
,
triglycerides
,
years of education
GTEx eQTL
Prostate
,
Skin_Sun_Exposed_Lower_leg
Download
Download page in JSON
Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
Please enable JavaScript to continue using this application.
Switch release
SNP set annotation with ANANASTRA
Sort
+/-100bp
log2-scale