rs7298644 chr12:132908829 G>C
- Sequence
tcttcccaagcccaccagctttca[G/C]cgttctccagcctcgccacacccc
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) T47D (invasive ductal carcinoma)
- ASB for transcription factors
- ZN189_HUMAN ZBT26_HUMAN ZN600_HUMAN ZXDB_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN189_HUMAN | 3.24 | n/a | 2.00 | n/a | n/a | |||
| ZBT26_HUMAN | 3.05 | n/a | 2.00 | n/a | n/a | |||
| ZN600_HUMAN | 3.06 | n/a | 2.00 | n/a | n/a | |||
| ZXDB_HUMAN | 2.37 | -2.20 | 2.00 | n/a | n/a | |||
| MYNN_HUMAN | 2.26 | n/a | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellum, Brain_Cortex, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Uterus, Vagina, Whole_Blood