rs72986630 chr19:11738921 C>T
- Sequence
ttccagggcgtctctctctcagcg[C/T]cagagccaggactcagagcgcagg
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- HDAC1_HUMAN SMAD5_HUMAN KDM1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HDAC1_HUMAN | 1.79 | -0.93 | 2.00 | n/a | n/a | |||
| SMAD5_HUMAN | 2.10 | -1.93 | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 1.70 | -0.48 | 2.00 | n/a | n/a |
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