rs72988188 chr2:237559438 G>T
- Sequence
ccttttccccatggctgcttttct[G/T]ctgcaacagcagatttggccagct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) breast tumor tissue
- ASB for transcription factors
- ESR1_HUMAN CLOCK_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.19 | 1.40 | 2.43 | n/a | No Hit | |||
| CLOCK_HUMAN | -1.59 | 1.98 | 1.75 | n/a | No Hit | |||
| AHR_HUMAN | n/a | 1.52 | 1.50 | n/a | No Hit |
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