rs730232 chr2:218034950 T>G
- Sequence
agaaggaagaaaagcaagagcagg[T/G]gctgaaaacgaaaaggaaactagc
- ASB in cell types
- GM12878 (female B-cells) adrenal gland Peyer's patch esophagus squamous epithelium
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.22 | 0.38 | 1.42 | n/a | No Hit | |||
| RAD21_HUMAN | 1.14 | -0.08 | 1.36 | n/a | n/a | |||
| IKZF1_HUMAN | 1.46 | -1.34 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.46 | -1.10 | 1.42 | n/a | n/a | |||
| TRI22_HUMAN | 1.20 | -0.78 | 1.22 | n/a | n/a |
Items per page:
1 – 5 of 5