rs73061248 chr19:48255857 C>A
- Sequence
gtaggacgggccaaatgggagaat[C/A]cccttaggtcggtttctctggttc
- ASB in cell types
- HEK293 (embryonic kidney) A549 (lung carcinoma) HepG2 (hepatoblastoma) SK-N-MC (Askin tumor)
- ASB for transcription factors
- GABPA_HUMAN TYY1_HUMAN CTCF_HUMAN MAFK_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GABPA_HUMAN | 1.47 | -0.17 | 1.42 | n/a | No Hit | |||
| TYY1_HUMAN | 1.27 | 0.03 | 1.47 | n/a | No Hit | |||
| CTCF_HUMAN | 0.91 | 0.34 | 1.37 | n/a | No Hit | |||
| MAFK_HUMAN | 2.37 | -2.68 | 1.33 | n/a | No Hit | |||
| ZBT40_HUMAN | 0.89 | -1.77 | 1.33 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Aorta, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Cells_Cultured_fibroblasts, Cells_EBV-transformed_lymphocytes, Colon_Transverse, Esophagus_Mucosa, Liver, Minor_Salivary_Gland, Muscle_Skeletal, Ovary, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Testis, Thyroid, Vagina, Whole_Blood