ADASTRA v1.6.10
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rs730997
chr21:32279179
A
>
G
Sequence
atgcgcgccgtgcggccttggcca[A/G]gcgtgatagtcactgcgcctgcgt
ASB in cell types
HEK293 (embryonic kidney)
CD14+ monocytes
foreskin keratinocyte
HEK293T (embryonic kidney)
ASB for transcription factors
STAT1_HUMAN
PRDM9_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN
2.00
-0.51
5.9·10
-4
1.00
2.00
n/a
No Hit
PRDM9_HUMAN
2.54
n/a
0.04
1.00
3.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
ldl cholesterol
GTEx eQTL
Brain_Cerebellar_Hemisphere
,
Skin_Not_Sun_Exposed_Suprapubic
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)