rs73102307 chr1:227319345 C>T
- Sequence
tcaccactgtcatcaaacctacac[C/T]cctgtgtgcatgcgcacacacact
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) cranial neural crest cells HepG2 (hepatoblastoma)
- ASB for transcription factors
- AP2A_HUMAN NRF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| AP2A_HUMAN | 2.10 | -4.02 | 2.50 | n/a | No Hit | |||
| NRF1_HUMAN | 0.01 | 1.41 | 1.39 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Artery_Tibial, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Pituitary, Testis, Whole_Blood