rs73120065 chr12:57263970 T>C
- Sequence
cactctgacattcccacgatagag[T/C]ggaaaggagatggttggaggctaa
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- ETV1_HUMAN SRF_HUMAN ZBTB2_HUMAN E4F1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ETV1_HUMAN | n/a | 3.09 | 2.00 | 3.46 | Concordant | |||
| SRF_HUMAN | -0.32 | 0.83 | 1.33 | n/a | No Hit | |||
| ZBTB2_HUMAN | -1.77 | 1.84 | 1.67 | n/a | n/a | |||
| E4F1_HUMAN | -1.86 | 2.05 | 2.00 | n/a | n/a |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Esophagus_Muscularis, Heart_Atrial_Appendage, Nerve_Tibial